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Vial Caps

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Overview

An essential component that screws on top of the glass eVOLVER vial. Connects to eVOLVER fluidics via luer lock.

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Versions

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4 Port Universal [Needle or Luer Lock]

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Overview

Option 1: [Recommended] Can be easily constructed with luer locks

Option 2: [Not Recommended] Can be used with needles like old caps, however this opens you up to preventable overflows as the old caps did

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Advantages

  1. [ enabled] - prevent vial overflows via air tight seal to vial

  2. Reusable connectors (no need to use needles) - connect tubing directly to luer lock on cap

  3. Easy assembly with few additional parts

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Assembly

GitHub

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5 and 7 Port [Nylon Tube Only]

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Overview

Use a honeycomb pattern for the ports to cram more ports onto the cap.

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Advantages

  1. [ enabled] - prevent vial overflows via air tight seal to vial

  2. Reusable connectors (no need to use needles) - connect tubing directly to luer lock on cap

  3. Up to 5 or 7 ports per cap (plus sampling port) - other caps only have 4 ports

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Assembly

GitHub

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[Old] Needle-Only

GitHub

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Overview

This is the cap that is currently given by default from FynchBio as of 25/01/15.

Requires needles, so cannot have a full seal on the vial. Therefore, should be used with caution because of overflow risk.

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Assembly

Must be assembled with needles at correct heights before each run.

Ports work with old needle setup if needed
Allows color coding of cap tubing to aid correct setup (see image above)
Emergency efflux
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Construction guide
Emergency efflux
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Construction guide
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4-port universal cap with nylon efflux straw on bottom.
5-port cap assembled

5 and 7 Port Nylon Tubing Caps Construction Protocol

Example cap with 5 ports, one of which is a [optional].

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Materials

  • 3D printed vial cap with ports for nylon tubing

    • the .stl file from GitHub

    • Order from

      • Service = SLS; material = nylon PA-12

      • Get "vapor smoothed" for better sealing

  • (1/8" OD)

  • flexible silicone rubber tubing (3/32" ID (inner diameter))

  • flexible silicone rubber tubing (3/32" ID (inner diameter))

  • Five 3/32" female barb to luer

  • Mixing tray (here a small weighboat)

  • Disposable applicator (here a wooden stir stick; pipette tip also works)

  • [Optional - for color coding ports] flexible silicone rubber tubing (3/32" ID (inner diameter))

  • [Optional - for color coding ports] flexible silicone rubber tubing (3/32" ID (inner diameter))

  • [Optional] 3D printed (SLS, nylon PA-12, vapor smoothed) for in-vial aeration

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Design

  1. Choose the minimum number of ports necessary

    1. You will need to block up ports that are unused if you want to do emergency efflux

    2. Therefore, choose the cap with the minimum number of ports that you need

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Construction Protocol

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0. Mark fluid lines on a glass eVOLVER vial (see above image)

  1. This will be used to set the efflux tube height, which sets the volume in the eVOLVER vial.

  2. Tape an eVOLVER vial

  3. Using a serological pipette, measure water into the vial in increments of 5 mL

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1. Cut Nylon Tubing to Various Lengths Needed

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Tip: To keep things tidy and make the process of constructing the cap easier, cut everything you need first and store in clearly labeled old micropipette tip boxes.

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The nylon tubing will straighten in the autoclave.

  1. Cut the necessary components of the hard semi-clear white nylon tubing (1/8" OD). Refer to the table below for lengths.

The table below has the necessary components for the construction of one cap.

Component
Length
  1. Cut the necessary components of the flexible nylon tubing. Refer to the table below for lengths.

The table below has the necessary components for the construction of one cap.

Component
Length
Flexible Tubing Color

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2. Assemble Cap

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When handling epoxy, use gloves to avoid getting it on skin as it can eventually lead to allergic reactions.

Steps

  1. You may need to drill out the ports in the 3D printed vial cap if powder is blocking them.

  2. Insert the hard semi-clear white nylon tubing (1/8" OD) into each corresponding port in the cap as per the image below.

  1. Screw the cap into the glass vial with measuring tape on the side and ensure that:

  1. Follow the epoxy directions to mix up a small amount of epoxy in a disposable dish. Use even pressure to get even amounts of resin and hardener. Use a toothpick or other similarly sized applicator to put the minimum amount of epoxy around the outside area of the cap where the ports and the hard nylon tubing connect, ensuring to spread the epoxy in between any gaps.

  2. Set assembled caps upright (with a vial rack or spare vials) so that epoxy doesn't drip into the sampling port as it cures.

  3. Set cap on its side to cure overnight.

For example, counting ports for PACE
  1. Lagoon: 1 vial-to-vial + 1 efflux + 2 inducers + 1 emergency efflux = 5 ports

  2. Cell reservoir: 1 media influx + 1 efflux + 1 vial-to-vial + 1 emergency efflux = 4 ports

  3. For simplicity, you may want to just use this type of cap and plug the extra port with a luer caparrow-up-right.

  • Efflux straw sets the volume of the culture

  • Increase influx accuracy

    1. Important for low volume influx like inducers

    2. Angled influx tubing should touch the inside of the glass vial to create a stream of liquid rather than drops.

    3. It should also be well above the efflux line to avoid contamination.

  • [Optional] Use different colors of tubing to denote different ports (see above)

  • Mark the volume at each increment on the tape at the bottom of the meniscusarrow-up-right

    1 x Bubbler Connector

    5/8 inches

    Clear

    Next day, add the appropriate color flexible nylon tubing (3/32" ID) to each hard nylon tubing (1/8" OD) as per the table above.

    Color flexible tubing connected to cap.
    1. [Bubbler Only] Connect the flexible nylon tubing (3/32" ID) bubbler connector component onto the inside end of the gas bubbler hard tubing. Allow the tubing to reach halfway through the connector tubing.

    1. [Bubbler Only] Connect the constructed gas bubbler onto the other side of the connector tubing. The end of the gas bubbler hard tubing that is inserted in the cap and the gas bubbler should connect as per image below.

    1 x Regular Efflux (culture volume of 25 mL)

    3 inches

    1 x Emergency Efflux

    1.5 inches

    2 x Influx

    2.5 inches

    1 x Gas Bubbler

    2 inches

    1 x Regular Efflux

    1.5 inches

    Blue

    1 x Emergency Efflux

    1.5 inches

    Black

    2 x Influx

    1.5 inches

    Clear

    1 x Gas Bubbler

    1.5 inches

    Downloadarrow-up-right
    Hubsarrow-up-right
    Plasticweld epoxyarrow-up-right
    Semi-clear white hard nylon tubingarrow-up-right
    Whitearrow-up-right
    Bluearrow-up-right
    connectorsarrow-up-right
    Redarrow-up-right
    Blackarrow-up-right
    bubbler
    bubbler
    Materials needed for cap assembly. Instructions for making glass vial with graduations below.
    Optional: When making multiple caps, it is easier to keep track of the varying lengths of tubing by storing them in old pipette tip boxes.
    1. Influx, 2. Influx, 3. Gas Bubbler, 4. Emergency Efflux, 5. Regular Efflux

    Red

    Universal Vial Cap Construction Guide (Luer Connectors Only)

    Universal vial cap with efflux tube in place.

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    Materials

    • 3D printed (SLS, nylon PA-12) vial cap

      • the .stl file from GitHub

      • Order from

      • Get these "vapor smoothed" for better sealing

      • Get white nylon PA12 (the default black will leach dye into your media)

      • Other default settings are fine

    • 4X - 3/32" female white nylon

      • Buy at least 4 x number of caps + extra

      • Nylon required to survive autoclaving (expansion differential between normally used polypropylene and nylon 3D printed vial causes epoxy to separate)

    • (1/8" OD)

    • [Required for overflow protection]

    • [Required for overflow protection]

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    Construction Protocol

    1. [Optional] Mark fluid lines on a glass eVOLVER vial (see below image)

      1. This will be used to set the efflux tube height, which sets the volume in the eVOLVER vial.

      2. Tape an eVOLVER vial

    1. Use gloves when working with epoxy

    2. Put epoxy into mixing tray and mix

      1. You don't need much because epoxy will likely set before you finish all vials

    1. Apply epoxy to barb of luer connector

      1. Be generous, but avoid the opening in the barb

      2. If you do get epoxy in the opening, blow it out or pick it out with a paperclip

    1. Press the connector into a port in the top of the cap, and twist a few times to spread epoxy

    1. Repeat steps 4 and 5 for the other ports

      1. When epoxy starts to solidify, mix more (in a new tray)

    2. Wait for at least an hour for epoxy to set somewhat

    1. Repeat steps 8 and 9 for all caps

    2. Allow epoxy to set 24 hours before using

    Using a serological pipette, measure water into the vial in increments of 5 mL
  • Mark the volume at each increment on the tape at the bottom of the meniscusarrow-up-right

  • Using a razor, trim nylon tubing so that it reaches the volume you have set

    1. Nylon tubing will straighten in the autoclave, so try and straighten it out as much as you can

    2. Cut to 53 mm for 20mL

    3. Otherwise, determine the correct length using graduated eVOLVER vial from step 1

      1. Cut the tubing to a longer length than you need

      2. Pushing it into the vial cap until you feel a little resistance (easy to accidentally go further, but there is a stopping point)

      3. Screw the cap on all the way

    4. Cut all tubing for the caps you are making

  • Epoxy one side of the outside of efflux tube (avoiding the hole)
  • Press the tube into left port of cap (when sampling port is facing you) (see below)

    1. Only press until you feel a slight resistance

    2. Twist once or twice to spread epoxy

  • Downloadarrow-up-right
    Hubsarrow-up-right
    barb to luer lockarrow-up-right
    Semi-clear white hard nylon tubingarrow-up-right
    Plasticweld epoxyarrow-up-right
    Rubber stopper arrow-up-right
    O ringarrow-up-right
    (Top) Connector without epoxy. (Bottom) Connector with epoxy on barb.
    Cap with efflux tube epoxied in to left port
    Estimate where to trim
  • Check in vial cap again

  • Measure length when you have this correct - use this for the rest of your vials (or use cut length as a guide for cutting the rest)